Sorry, SilverDragon. I was so overcome I could not vote. (The doctors say it was only KK's superhuman constitution which hastened such a rapid recovery. KK's case-study will now be taught in medical universities galaxy-wide.)
Torps. cable_guy said it best:
Torpedos are by far the best. Anything too slow to dodge torpedoes is too tough for missiles. Anything fast enough dodge torpedoes can be taken down by guns and turrets. Missiles are good on smaller ships, because the launchers are smaller, but the added whack of torpedos outweigh the downsides.
KK agrees.
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“You will find that our crew will be either the most valuable, loyal, and trustworthy of allies, or ... if you insist on trying to swallow us up -- the worst of enemies. The choice is yours. And should you choose to fight us ... don’t bring a knife to a gunfight!”